Wed, 19 Jan 2022 00:40:14 UTC

Information for RPM R-GenomicRanges-1.38.0-2.fc32.i686.rpm

ID20151661
NameR-GenomicRanges
Version1.38.0
Release2.fc32
Epoch
Archi686
SummaryRepresentation and manipulation of genomic intervals
DescriptionThe ability to efficiently store genomic annotations and alignments is playing a central role when it comes to analyze high-throughput sequencing data (a.k.a. NGS data). The package defines general purpose containers for storing genomic intervals as well as more specialized containers for storing alignments against a reference genome.
Build Time2020-01-28 09:52:38 GMT
Size2,088,714
e4d45f39fe66756cd2d597ba9ca9838a
LicenseArtistic 2.0
Buildrootf32-build-19246762-1345214
Provides
R(GenomicRanges) = 1.38.0
R-GenomicRanges = 1.38.0-2.fc32
R-GenomicRanges(x86-32) = 1.38.0-2.fc32
Obsoletes No Obsoletes
Conflicts No Conflicts
Requires
R(BiocGenerics) >= 0.25.3
R(GenomeInfoDb) >= 1.15.2
R(IRanges) >= 2.19.9
R(S4Vectors) >= 0.23.19
R(XVector) >= 0.19.8
R(methods)
R(stats)
R(stats4)
R(utils)
R-core >= 2.10
libR.so
libc.so.6
libc.so.6(GLIBC_2.1.3)
libc.so.6(GLIBC_2.4)
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsZstd) <= 5.4.18-1
rtld(GNU_HASH)
Recommends No Recommends
Suggests
R(AnnotationDbi)
R(AnnotationHub)
R(BSgenome)
R(BSgenome.Hsapiens.UCSC.hg19)
R(BSgenome.Mmusculus.UCSC.mm10)
R(BSgenome.Scerevisiae.UCSC.sacCer2)
R(Biobase)
R(BiocStyle)
R(Biostrings) >= 2.25.3
R(DESeq2)
R(DEXSeq)
R(GenomicAlignments)
R(GenomicFeatures)
R(Gviz)
R(KEGG.db)
R(KEGGgraph)
R(Matrix)
R(RNAseqData.HNRNPC.bam.chr14)
R(RUnit)
R(Rsamtools) >= 1.13.53
R(SummarizedExperiment) >= 0.1.5
R(TxDb.Athaliana.BioMart.plantsmart22)
R(TxDb.Dmelanogaster.UCSC.dm3.ensGene)
R(TxDb.Hsapiens.UCSC.hg19.knownGene)
R(TxDb.Mmusculus.UCSC.mm10.knownGene)
R(VariantAnnotation)
R(annotate)
R(digest)
R(edgeR)
R(hgu95av2.db)
R(hgu95av2probe)
R(knitr)
R(pasillaBamSubset)
R(rtracklayer)
Supplements No Supplements
Enhances No Enhances
Files
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/usr/lib/.build-id0
/usr/lib/.build-id/730
/usr/lib/.build-id/73/de29490012ccbdce054ed9cf813f959a91e23665
/usr/lib/R/library/GenomicRanges0
/usr/lib/R/library/GenomicRanges/CITATION940
/usr/lib/R/library/GenomicRanges/DESCRIPTION2,947
/usr/lib/R/library/GenomicRanges/INDEX1,881
/usr/lib/R/library/GenomicRanges/Meta0
/usr/lib/R/library/GenomicRanges/Meta/Rd.rds3,087
/usr/lib/R/library/GenomicRanges/Meta/features.rds132
/usr/lib/R/library/GenomicRanges/Meta/hsearch.rds3,289
/usr/lib/R/library/GenomicRanges/Meta/links.rds2,621
/usr/lib/R/library/GenomicRanges/Meta/nsInfo.rds1,215
/usr/lib/R/library/GenomicRanges/Meta/package.rds2,260
/usr/lib/R/library/GenomicRanges/Meta/vignette.rds705
/usr/lib/R/library/GenomicRanges/NAMESPACE4,051
/usr/lib/R/library/GenomicRanges/NEWS43,995
/usr/lib/R/library/GenomicRanges/R0
/usr/lib/R/library/GenomicRanges/R/GenomicRanges1,056
/usr/lib/R/library/GenomicRanges/R/GenomicRanges.rdb1,227,395
/usr/lib/R/library/GenomicRanges/R/GenomicRanges.rdx8,071
/usr/lib/R/library/GenomicRanges/doc0
/usr/lib/R/library/GenomicRanges/doc/ExtendingGenomicRanges.R1,254
/usr/lib/R/library/GenomicRanges/doc/ExtendingGenomicRanges.Rnw4,706
/usr/lib/R/library/GenomicRanges/doc/ExtendingGenomicRanges.pdf141,161
/usr/lib/R/library/GenomicRanges/doc/GRanges_and_GRangesList_slides.R12,136
/usr/lib/R/library/GenomicRanges/doc/GRanges_and_GRangesList_slides.Rnw27,798
/usr/lib/R/library/GenomicRanges/doc/GRanges_and_GRangesList_slides.pdf250,263
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesHOWTOs.R21,950
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesHOWTOs.Rnw38,823
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesHOWTOs.pdf234,384
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesIntroduction.R7,210
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesIntroduction.Rmd18,637
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesIntroduction.html695,894
/usr/lib/R/library/GenomicRanges/doc/Ten_things_slides.R7,470
/usr/lib/R/library/GenomicRanges/doc/Ten_things_slides.Rnw9,050
/usr/lib/R/library/GenomicRanges/doc/Ten_things_slides.pdf138,504
/usr/lib/R/library/GenomicRanges/doc/index.html3,855
/usr/lib/R/library/GenomicRanges/extdata0
/usr/lib/R/library/GenomicRanges/extdata/feature_frags.txt283
/usr/lib/R/library/GenomicRanges/help0
/usr/lib/R/library/GenomicRanges/help/AnIndex15,366
/usr/lib/R/library/GenomicRanges/help/GenomicRanges.rdb202,082
/usr/lib/R/library/GenomicRanges/help/GenomicRanges.rdx759
/usr/lib/R/library/GenomicRanges/help/aliases.rds2,782
/usr/lib/R/library/GenomicRanges/help/paths.rds381
/usr/lib/R/library/GenomicRanges/html0
/usr/lib/R/library/GenomicRanges/html/00Index.html37,682
/usr/lib/R/library/GenomicRanges/html/DelegatingGenomicRanges-class.html1,185
/usr/lib/R/library/GenomicRanges/html/GNCList-class.html5,881
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