| ID | 1663602 | ||||||||||||||||||||||||||||||||||||||||||||||
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| Package Name | bfast | ||||||||||||||||||||||||||||||||||||||||||||||
| Version | 0.7.0a | ||||||||||||||||||||||||||||||||||||||||||||||
| Release | 26.fc34 | ||||||||||||||||||||||||||||||||||||||||||||||
| Epoch | |||||||||||||||||||||||||||||||||||||||||||||||
| Source | git+https://src.fedoraproject.org/rpms/bfast.git#16c3c0f09e388892dc93af53b9e72d081cfebea0 | ||||||||||||||||||||||||||||||||||||||||||||||
| Summary | Blat-like Fast Accurate Search Tool | ||||||||||||||||||||||||||||||||||||||||||||||
| Description | BFAST facilitates the fast and accurate mapping of short reads to reference sequences. Some advantages of BFAST include: Speed: enables billions of short reads to be mapped quickly. Accuracy: A priori probabilities for mapping reads with defined set of variants. An easy way to measurably tune accuracy at the expense of speed. Specifically, BFAST was designed to facilitate whole-genome resequencing, where mapping billions of short reads with variants is of utmost importance. BFAST supports both Illumina and ABI SOLiD data, as well as any other Next-Generation Sequencing Technology (454, Helicos), with particular emphasis on sensitivity towards errors, SNPs and especially indels. Other algorithms take short-cuts by ignoring errors, certain types of variants (indels), and even require further alignment, all to be the "fastest" (but still not complete). BFAST is able to be tuned to find variants regardless of the error-rate, polymorphism rate, or other factors. | ||||||||||||||||||||||||||||||||||||||||||||||
| Built by | filiperosset | ||||||||||||||||||||||||||||||||||||||||||||||
| State | complete | ||||||||||||||||||||||||||||||||||||||||||||||
| Volume | prod | ||||||||||||||||||||||||||||||||||||||||||||||
| Started | Fri, 01 Jan 2021 06:16:57 UTC | ||||||||||||||||||||||||||||||||||||||||||||||
| Completed | Fri, 01 Jan 2021 06:20:39 UTC | ||||||||||||||||||||||||||||||||||||||||||||||
| Task | build (rawhide, /rpms/bfast.git:16c3c0f09e388892dc93af53b9e72d081cfebea0) | ||||||||||||||||||||||||||||||||||||||||||||||
| Extra | {'source': {'original_url': 'git+https://src.fedoraproject.org/rpms/bfast.git#16c3c0f09e388892dc93af53b9e72d081cfebea0'}} | ||||||||||||||||||||||||||||||||||||||||||||||
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| Changelog | * Fri Jan 01 2021 Filipe Rosset <rosset.filipe@gmail.com> - 0.7.0a-26 - Fix FTBFS rhbz#1863246 * Sat Aug 01 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.0a-25 - Second attempt - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild * Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.0a-24 - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild * Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.0a-23 - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild * Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.0a-22 - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild * Mon Jul 15 2019 Petr Pisar <ppisar@redhat.com> - 0.7.0a-21 - Regenerate a build script (bug #1674691) - Upstream moved to <https://github.com/nh13/BFAST> * Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.0a-20 - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild |